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Does repackager capture file removal

Is Repackager supposed to capture the fact the some files are removed during an installation?

I have a complex set of steps that include removal of some old files as well as installing new ones. Will the repackager capture the file removals? I tried a simple test and it did not seem to.

If it won't, then what is the best way to handle it? I can't just script the removals because they are done by a program that searches out and deletes certain files (from old versions of the program that I am upgrading). I want to capture what it does.
(1) Reply
If my memory serves, I thought it would. Did you check Repackager's settings?