Not really....
I guess the key here is that I am not developing this for internal deployment; I don't know what all possibilities there are as far as what technologies our clients may be using. The third party vendor provides us with an msi and an exe. I understand the whens and hows of CA's, but making sure the dependencies are handled at the appropriate times is a headache. If I run my IS 10.5 install, their msi and then their exe on a machine independently, all goes well. If I run in that order in a single setup, it fails. I was hoping that by utilizing the Repackager in AdminStudio I would be able to overcome this. I played with AdminStudio for the last day & 1/2, and I am pretty sure this is not how I want to go forward, though.
I apologize for the unclarity of my first post, but its about as difficult to deploy as it is to describe.
Thank you for your reply.